2 Workflow
2.1 Info
In the following, I give an overview over the individual steps done in during de novo assembly of the barred hamlet (Hypoplectrus puella) genome.
Within the scheme, each arrow represents a script (or class of scripts) connecting individual steps of the assembly/ analysis.
The respective scripts are store in the folders $WORK/1_assembly_scripts
& $WORK/2_reSeq-scripts
.
For the final visualization (the green squares in panel 2.2.Popgen), additional documentation is provided in the following pages.
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