Format genome wide x axis

Source: R/hypogen_basics.R

scale_x_hypo_LG adjusts the x axis to match the hamet genome.

scale_x_hypo_LG(
  ...,
  name = "",
  expand = c(0, 0),
  breaks = (hypo_karyotype$GSTART + hypo_karyotype$GEND)/2,
  labels = 1:24,
  position = "top"
)

Arguments

...

parameters passed to ggplot2::scale_x_continuous()
name

string/ expression, x axis title
expand

numeric vector of length 2
breaks

numeric vector, x axis breaks
labels

string vector, x axis labels
position

string ("top"/ "bottom"), axis placement

Details

Each of the LGs is labelled with on tick which is placed in the center of the LG. The should be combined with hypogen::geom_hypo_LG

See also

geom_hypo_LG, scale_color_hypo_LG

Examples

ggplot() +
  geom_hypo_LG() +
  scale_fill_hypo_LG_bg() +
  scale_x_hypo_LG() +
  coord_cartesian(ylim = c(0, 1)) +
  theme_hypo()