get_gxp imports genotype x phenotype association data and adds the genomic position.
get_gxp(file)
| file | input file |
|---|
The phenotype trait name is extracted from the file name and converted into a label for plotting. Then, the data is imported and reduced to the columns containg the genomic poistion and the p values of the wald test. The column containing the p values is renamed according to the trait.
Other General functions:
darken(),
export_2_latex(),
get_dxy(),
get_fst_summary_data(),
get_fst(),
get_pi(),
join_list(),
lighten(),
process_input(),
refactor()