get_msmc imports cross coalescence data and extracts according run information.
get_cc(file, cc_groups, cc_path, mu = 3.7e-08, gen = 1)
| file | cross coalescence file |
|---|---|
| cc_groups | cross coalescence group assignment reference table |
| cc_path | cross coalescence results path |
| mu | mutation rate mu |
| gen | generation time in years |
The data is imported and run components are extracted from the a reference table, and added to the data.
Other Figure 2:
get_msmc()