The R package GenomicOriginsScripts provides the scripts needed to reproduce the figures and the supplementary figures of the paper Ancestral variation, hybridization and modularity fuel a marine radiation by Hench, Helmkampf, McMillan and Puebla.
Dependencies
GenomicOriginsScripts depends on several non-CRAN R-packages. To be able to install the package successfully, the following packages will also need to be installed:
install.packages("remotes")
remotes::install_bioc("rtracklayer")
remotes::install_github("YuLab-SMU/ggtree")
remotes::install_github("k-hench/hypogen")
remotes::install_github("k-hench/hypoimg")Install
To install GenomicOriginsScripts please run:
remotes::install_github("k-hench/GenomicOriginsScripts")This package is intended as a supplement to the code acompanying the publication and is used extensively in R scripts that produce the figures of that publication.
